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Building GAMP 5-Compliant Pharma Solutions: A Software Engineering Approach to PLC Programming

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There’s a common belief in pharma automation that as long as the machine runs, the software is “fine.” But that mindset rarely survives a regulatory audit.

GAMP 5 compliance demands more: provable, risk-managed, and lifecycle-controlled systems. At the core of this lies the PLC layer – the code that drives core pharma manufacturing activities like fluid flow, dosing logic, CIP sequences, and safety interlocks.

Yet in many vendor ecosystems, PLC programming remains detached from formal software lifecycle practices. It often gets patched, duplicated, or versioned in silos and documented only after the fact.

The real challenge is this: GAMP 5 doesn’t just ask if the code works. It demands to know why the code was written, how it ties to risk, and what traceability exists from user requirements to implementation.

Vendors who understand this shift have started evolving their development approach. They build solutions that inspire lasting confidence – from the first User Requirements Specification (URS) review to the last rung of ladder logic.

Why Compliance Demands a Software-First Mindset

Compliance is often framed around devices, enclosures, and hardware certifications. But true compliance strength lies in how the software, especially PLC logic, is designed, tested, and managed.

Treating PLC programming as software engineering means embedding quality, risk logic, and traceability directly into the code. Not retrofitting it post-hoc. Not stitching documents afterward.

This mindset reframes PLC code from an infrastructure tool to a strategic compliance asset, one that holds up in audits, accelerates validation, and aligns cleanly with product goals.

Start with Software, Stay with Traceability

GAMP 5’s principle is clear, “quality must be engineered into the product lifecycle from the start.” From requirements and design to coding and release, every phase must support traceability and risk alignment.

For PLC programming, this means writing code that is directly traceable to functional specifications and risk assessments. Every rung of ladder logic, every function block, should have a clear purpose linked to compliance goals.

This embedded approach eliminates the costly, error-prone cycle of “papering” compliance after development. Instead, it creates a product that is inspection-ready at every stage.

GAMP 5-Compliant PLC Development Journey

PLC Programming as Software Engineering, Not Infrastructure

Too often, PLCs are treated as project utilities. Something the automation team wires together and hands off. But the teams making the biggest progress with digital pharma platforms see things differently.

They treat PLC logic like they would any high-impact software module: designed for clarity, tested with intention, and released through a structured pipeline.

That mindset transforms how teams build.

➜ It unlocks libraries of validated function blocks that can be reused across machines and lines.

➜ It encourages integrated toolchains that connect PLC editors with lifecycle systems like Jira or Polarion.

➜ It brings DevOps-style traceability to embedded environments with commit histories, automated test outputs, and change approvals.

What GAMP 5 Expects from Your PLC-Driven Pharma Solution?

GAMP 5’s risk-based framework guides vendors to focus validation efforts where they matter most.

For PLC code, this means:

➡️ Structured Development:

Code modularly, using reusable validated function blocks that represent discrete, testable functions.

➡️ Traceability:

Link each code module back to user requirements and risk assessments. Maintain trace matrices that cover PLC code and system-level design.

➡️ Version Control:

Use tools that enable structured version management of PLC programs alongside documentation and testing artifacts.

➡️ Change Management:

Ensure every change in PLC logic is reviewed, approved, and documented before deployment.

Following these practices transforms PLC programming from a hidden black box to a transparent, compliant software asset.

Software Challenges and Solutions in Achieving GAMP 5 Compliance

Challenge 1: Fragmented Development Practices

PLCs often live in silos. Control logic gets developed separately from MES or SCADA systems, with little integration between version control, requirements management, or testing tools.

This fragmentation makes traceability difficult and complicates change control.

Solution:

Adopt integrated toolchains that connect PLC programming environments with requirements and validation systems.

Using unified version control and traceability tools allows teams to manage code, tests, and documentation within a single lifecycle framework which closes gaps and accelerates validation.

Challenge 2: Lack of Structured Software Engineering Mindset

PLCs historically receive less software engineering rigor. Changes happen on the fly, documentation trails behind, and testing is manual or ad hoc.

This reactive approach invites audit risks and slows scaling.

Solution:

➜ Treat PLC logic as core software modules.

➜ Build modular, reusable function blocks with clear test cases.

➜ Automate testing where possible to generate repeatable evidence for audits.

➜ Embed quality and risk management early in the development lifecycle.

Challenge 3: Managing Change Without Breaking Validation

Pharma manufacturing environments evolve.

New products, recipe changes, and continuous improvements require frequent PLC logic updates. Yet, uncontrolled changes risk invalidating previous qualification efforts and causing costly delays.

Solution:

➜ Implement strict change management workflows that require review and approval before deploying PLC updates.

➜ Use version control tools that maintain detailed histories and enable rollback if needed.

➜ Collaborate closely with validation and quality teams to align change approvals with compliance requirements.

Challenge 4: Scaling Compliance Across Multiple Lines and Sites

As pharma companies grow, maintaining consistent compliance across lines and plants becomes increasingly complex.

Without scalable software practices, duplication and divergence can erode traceability and increase audit risk.

Solution:

➜ Develop validated libraries of PLC function blocks and control templates that can be reused and adapted with minimal effort.

➜ Standardize toolchains and documentation processes that enforce uniformity.

➜ This approach reduces rework, accelerates validation cycles, and supports global scaling.

What Software Vendors Can Deliver That Automation Vendors Can’t?

PLC Compliance as a Competitive Advantage

Vendors focused on lifecycle-driven software deliver something beyond functional control. They deliver confidence.

That confidence matters at every level:

✔️ To the Engineering Team: It means faster builds, easier change control, and reusable assets.

✔️ To the Quality Lead: It means every system aligns with validation expectations.

✔️ To the Client Procurement Team: It means they’re investing in a solution, not a workaround.

✔️ To Auditors: It means the system is inspectable, explainable, and well-governed.

Here’s How Software-led Teams Stand Apart:

1. Validated PLC Libraries

Function blocks that come with built-in test protocols, clear documentation, and risk linkage. This accelerates qualification and scales cleanly across use cases.

2. Lifecycle-Integrated Toolchains

In environments where code lives in version-controlled repositories, requirements sit in traceable systems, and every deployment step is logged and reviewable.

3. Automated Validation Pipelines

Structured test benches for logic code. These simulate key operations and capture output in formats ready for IQ/OQ documentation.

4. Cross-Team Collaboration by Default

Engineering doesn’t write in a silo. Validation teams contribute to requirements. Quality leaders review test coverage. This collaboration reduces cycle time and strengthens trust.

The Business Gains for Pharma Software Vendors

Across Europe and globally, pharma manufacturers are leaning heavily on automation partners who can stand tall in audits, scale across validation-heavy environments, and offer confidence with every release.

For software vendors, this shift offers significant competitive and commercial value.

1. Strong Market Signals

As per DataIntelo, the pharmaceutical compliance software market is expanding at a healthy pace, valued at over USD 1.5 billion in 2023 and tracking toward USD 3.2 billion by 2032, with an 8.2% CAGR.

2. Efficiency You Can Measure

According to InfoDesk, companies adopting risk-based validation frameworks have reduced compliance-related manual effort by as much as 40%.

3. A Better Stake in the Game

Software vendors who deliver ready-to-validate systems at the control layer bring something rare to the table – “certainty.” Clients value it, procurement teams flag it as a differentiator, and regulators recognize the maturity behind it.

Azilen’s Perspective: Compliance as a Software Outcome!

When vendors bring lifecycle thinking to the logic level, not just the UI or database, they create systems that inspire confidence. Confidence from quality leaders who sign off on audits. Confidence from validation teams who trust the traceability. Confidence from clients who rely on systems to scale without uncertainty.

At Azilen, we help pharma solution vendors build GAMP 5-compliant platforms where PLC programming, lifecycle alignment, and traceability move together.

If you’re building for regulated markets and view compliance as a business enabler, let’s explore how to scale that mindset into your engineering practice.

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Swapnil Sharma
Swapnil Sharma
VP - Strategic Consulting

Swapnil Sharma is a strategic technology consultant with expertise in digital transformation, presales, and business strategy. As Vice President - Strategic Consulting at Azilen Technologies, he has led 750+ proposals and RFPs for Fortune 500 and SME companies, driving technology-led business growth. With deep cross-industry and global experience, he specializes in solution visioning, customer success, and consultative digital strategy.

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